Lab members
- Chris L. Barnes, github; publications
- Elizabeth Barsotti, publications
- Albert Cardona (personal page, external personal page), github, publications
- Jiaqi Chen
- Marc Corrales, github, publications
- Ana Correia, publications
- André Castro, publications
- Pedro Gómez Gálvez, publications
- Daniel Han, publications
- Laura Lungu, publications
- Samia Mohinta, github, publications
- Scott Wilson
See former lab alumni.
Selected publications
- Barnes et al. 2020. "Synaptic counts approximate synaptic contact area in Drosophila" bioRxiv
- Eschbach C., Fushiki A. et al. 2020. "Circuits for integrating learnt and innate valences in the fly brain". bioRxiv
- Eschbach C., Fushiki A. et al. 2020. "Recurrent architecture for adaptive regulation of learning in the insect brain". Nature Neuroscience 23(4):544-555 (bioRxiv 2019)
- Valdes-Aleman, J. et al. 2020. "Comparative connectomics reveals how partner identity, location, and activity specify synaptic connectivity in Drosophila". Neuron 109(1):105-122.e7 (bioRxiv 2019)
- Eichler K., Li F., Litwin-Kumar A. et al. 2017. "The complete connectome of a learning and memory centre in an insect brain", Nature 548(7666):175-82 (bioRxiv 2017)
- Gerhard S. et al. 2017. "Conserved neural circuit structure across Drosophila larval development revealed by comparative connectomics". eLife 6:e29089 (bioRxiv 2017)
- Schneider-Mizell CM., Gerhard S. et al. 2016. "Quantitative neuroanatomy for connectomics in Drosophila". eLife 5: e12059
- Jovanic T., Schneider-Mizell, CM. et al. 2016 "Competitive disinhibition mediates behavioral choice and sequences in Drosophila". Cell 167(3):858-870
- Zwart M. et al. 2016. "Selective inhibition mediates the sequential recruitment of motor pools". Neuron 91(3):615-628
- Fushiki A. et al. 2016. "A circuit mechanism for the propagation of waves of muscle contraction in Drosophila". eLife 5:e13253
- Berck ME, Khandelwal A. et al. 2016. "The wiring diagram of a glomerular olfactory system". eLife 5:e14859
- Ohyama T., Schneider-Mizell CM et al. 2015. "A multilevel multimodal circuit enhances action selection in Drosophila". Nature 520(7549):633-639
Resources
- Published neurons and circuits of the Drosophila central nervous system in the first instar larva, as reconstructed from serial section electron microscopy. Accessible with the open source CATMAID software (github repository and documentation). Kindly hosted by the Virtual Fly Brain.
- CATMAID open source software for connectomics (github; documentation).
- Fiji python tutorial: learn image processing with the open source software Fiji (is Just ImageJ) and the python programming language.
- Stephan Saalfeld, master student (2008), co-supervised together with Pavel Tomancak, github, lab's github, publications
- Ignacio Arganda Carreras, postdoc (2009--2010), github, publications
- Mark Longair, postdoc and software engineer (2009--2012), github, publications
- Casey Schneider-Mizell, postdoc (2010--2017), github, publications
- Kenny Floria, undergraduate researcher (2010)
- Alex Berthold van der Bourg, master student (2011-2012), publications
- Stephan Gerhard, graduate student (2011--2015), github, publications
- Jan Funke, graduate student, co-supervised with Matthew Cook (2010--2014), github, publications
- Ingrid Andrade, visiting student (2012) and technician (2013--2015), publications
- Waleed Osman, technician (2013)
- Laura Herren, technician (2013)
- Brittany Kemp, technician (Summer 2013)
- Tom Kazimiers, software engineer (2013--2019), github, publications
- Mei Shao, senior electrophysiologist (2013--2019)
- Li Feng, postdoc (2014--2017), publications
- Andrew Champion, software engineer (2014--2016) and graduate student (2016--2020), github, publications
- Elise Croteau-Chonka, undergraduate summer student (2013) and technician (2016), publications
- Akira Fushiki, visiting student (2013, 2014) and postdoc (2015--2017), publications
- Matthew E. Berck, postdoc (2017--2018), publications
- Rebecca Arruda, technician (2018--2019)
- Xinyu Tang, visiting undergraduate student (October 2019 to March 2020).
- Ayesha Khan, summer student (August and September, 2021).